PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026397266.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 228aa MW: 25037.4 Da PI: 8.1024 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 125.9 | 1.9e-39 | 12 | 113 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkCa+dCv+apyf++eq p++fa++hk+FGasnv+kll ++p +r +a+ +++yeA+ar+rdPvyG+v++i++lqqq+++l+a+l XP_026397266.1 12 PCGACKFLRRKCASDCVFAPYFCSEQgPARFAAIHKVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARVRDPVYGCVAHIFALQQQVACLQAQL 106 7*************************99******************************************************************* PP DUF260 95 allkeel 101 ++k++l XP_026397266.1 107 MQVKSQL 113 *999875 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 228 aa Download sequence |
MATGNGGGSG SPCGACKFLR RKCASDCVFA PYFCSEQGPA RFAAIHKVFG ASNVSKLLLH 60 VPVPDRCEAV VTIAYEAQAR VRDPVYGCVA HIFALQQQVA CLQAQLMQVK SQLVNKVAAD 120 TRSLENHNWM ENVAAAVTSQ HMSYPATYMR STVSPQSSLE SVDNNNCSNN MDISSIQGMH 180 YTSSGRDNGY NMNEHLHSYQ SCNKKRMISN NELGELQALA LRMMRNDF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G42430.1 | 9e-64 | LBD family protein |