PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026396857.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 306aa    MW: 33793.1 Da    PI: 9.8021
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026396857.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.62e-1281128354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+ErrRR+riNs f +L+++l +     ++K +Ka+ L+ Av+ + +L
  XP_026396857.1  81 KSHKEAERRRRERINSHFLTLKSVLSNT----CTKTDKASLLTAAVNKVLEL 128
                     68***********************996....6*************977666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MTSISRFFDG CPSSNEVAHI DYGHHVSKVG SSLVGTKRSR TTANNNYIVS SKDEGAFDVD  60
GEKLLKKEED AADHRPPTKF KSHKEAERRR RERINSHFLT LKSVLSNTCT KTDKASLLTA  120
AVNKVLELKT EADKAMNPPD EPEYKENIKF WPFPNGNDDL VLAYYDDENS TKFLRATFSC  180
EDKVGLMSEV AKAVRSVKEI GKLVKSEMSI VGGRTKCMLL IKLLKTSTST PTPGGGGTET  240
TGGGTTTKST VNQGKNSNTS TRRSIICDDD DLVKLRRALK PVVNKQTTTT GSGYKVSLYN  300
SRFFHH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18792ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.17e-22bHLH family protein