PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026396854.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 489aa MW: 55109.5 Da PI: 4.4445

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026396854.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24	6.8e-08	252	292	7	52
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52 + Er+RR+r+N+ +++Lr+++P+ +K++K ++L A +++ XP_026396854.1 252 MSERNRRKRLNQQLFTLRSIVPNI-----TKMDKRTVLVDALAHLQ 292 67*********************6.....69999999988888776 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MDDIFEEFVG FLMLEEAANT NEEVVIDDSS HHNHQQDQQY RHHSSTLAPI IGRVEDDPLL 60 TSMMSSSDYD IINYERDYQS GRDLSDPPHN QSGGLIYQSD ELQSDNILLD ITHNFQANCS 120 INQYYDTIKT STLQQQQAAD VCYDHPQAQT PSPSIPYLID NVSIDADDNK LLDRQPSTAP 180 GPHVREQEHG QQALPITVTN DVQGLKKRRR QQKQVLVDHV EDEEEEEEDV DLVPNEGGDD 240 DQSSPIISKN LMSERNRRKR LNQQLFTLRS IVPNITKMDK RTVLVDALAH LQNILRQTEI 300 EIENQNKISS STAVDDHGDA MVDSSVSPNS SVLNVKMDHI PCHGAVLLEK NVADVNVDDD 360 QLQPLRQIVL PIEPAITSLP SERAIFPAII KMEAEKLDEE RYLIKIVFNK VLGTMGQVQR 420 SVEMLKGVDF INVSVSEYDQ HHMQSSCFLR VKKIKGSLPM ADEDNILNML KATAKQLGLL 480 LSPAAYSSE

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MDDIFEEFVG FLMLEEAANT NEEVVIDDSS HHNHQQDQQY RHHSSTLAPI IGRVEDDPLL  60
TSMMSSSDYD IINYERDYQS GRDLSDPPHN QSGGLIYQSD ELQSDNILLD ITHNFQANCS  120
INQYYDTIKT STLQQQQAAD VCYDHPQAQT PSPSIPYLID NVSIDADDNK LLDRQPSTAP  180
GPHVREQEHG QQALPITVTN DVQGLKKRRR QQKQVLVDHV EDEEEEEEDV DLVPNEGGDD  240
DQSSPIISKN LMSERNRRKR LNQQLFTLRS IVPNITKMDK RTVLVDALAH LQNILRQTEI  300
EIENQNKISS STAVDDHGDA MVDSSVSPNS SVLNVKMDHI PCHGAVLLEK NVADVNVDDD  360
QLQPLRQIVL PIEPAITSLP SERAIFPAII KMEAEKLDEE RYLIKIVFNK VLGTMGQVQR  420
SVEMLKGVDF INVSVSEYDQ HHMQSSCFLR VKKIKGSLPM ADEDNILNML KATAKQLGLL  480
LSPAAYSSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29930.4	2e-15	bHLH family protein