PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026396853.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 224aa MW: 25048.8 Da PI: 5.364 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25.5 | 2.4e-08 | 2 | 42 | 8 | 53 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 Er+RR+r+N+ +++Lr l+P +K++K ++L A Y+++ XP_026396853.1 2 SERNRRKRLNNQLFTLRGLVPCI-----TKMDKRSVLVDALAYLQD 42 6*********************7.....6**************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 224 aa Download sequence |
MSERNRRKRL NNQLFTLRGL VPCITKMDKR SVLVDALAYL QDILNQTQKE IEAGVTEDPG 60 HAIIDSAAMS PDSLTENVEI DHPPCHHLGV VLEKSVINAD VEGQPQPIMS TALEPKTTPY 120 SAVFPAITKM EAEKVDEEIY MLKIVYNKAL GAMSQVQRSV EMLKGFDFIN VSVSEYDQHH 180 MQSSSFLRVK KIKGSLLVTD EENLIERVKV MAKQLGLNLP SADD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G29930.4 | 2e-13 | bHLH family protein |