PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026395244.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | ARR-B | ||||||||
Protein Properties | Length: 438aa MW: 49119.5 Da PI: 6.8441 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 65.2 | 1.2e-20 | 114 | 167 | 1 | 55 |
G2-like 1 kprlrWt.peLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ W+ peLH++Fvea +LG +kA+P++il m+v+gLt+e+v+SHLQkYR XP_026395244.1 114 KTRISWAdPELHAKFVEAFYKLG--DKAVPSKILVEMNVQGLTREKVASHLQKYRK 167 6899**758*************4..89****************************5 PP | |||||||
2 | Myb_DNA-binding | 28.8 | 2.9e-09 | 122 | 166 | 6 | 48 |
HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 +e++ ++v+a+ +lG + +++I +m+ +g+t++ + s++qky+ XP_026395244.1 122 PELHAKFVEAFYKLGDKaVPSKILVEMNvQGLTREKVASHLQKYR 166 8**************99***************************7 PP | |||||||
3 | Response_reg | 32.1 | 5.9e-12 | 1 | 56 | 53 | 109 |
CTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 53 mpgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 m +m+G+ellk+i e ++p+i+++++g+ e++ + ++ Ga d+l+Kp + +e+ + XP_026395244.1 1 MDEMNGFELLKTIGLEM-DIPVIMMSTSGDYETVMKGIEHGACDYLVKPPSLKEIQN 56 889**********6654.8******************************98888765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 438 aa Download sequence |
MDEMNGFELL KTIGLEMDIP VIMMSTSGDY ETVMKGIEHG ACDYLVKPPS LKEIQNIWQH 60 VVRLKKNKST LSAPDTEKKG TERNLRRKNN NQTKNNEDED SSHSSDELLP NQKKTRISWA 120 DPELHAKFVE AFYKLGDKAV PSKILVEMNV QGLTREKVAS HLQKYRKILE KQSKKPNSIT 180 TFNGMSGRLR NSTFPSLLNL QFQNGRNYLS SSQSYHRGTS QLSHYGVTPN ASNRSSVNPH 240 PHFLPSTQPY TSQYSSTLGT INQNPQKIQV SDSTMHNLHN QTYASGLNAQ TFSSSSKLFD 300 PHMVSSSKFP DYNANIHSGT SNFQFGEASN VLANNNLFDD LTYYPMLDHA SSSNLNTVFQ 360 SDYTFNMTHS TLSGYDDGMR NMIAPTIPST NVMESQSVDQ IPSLENPLAF LETDSDHLGS 420 YSSADDDLSA AIRPYQQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58080.1 | 7e-41 | ARR-B family protein |