PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026393413.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 512aa    MW: 57843.5 Da    PI: 5.8958
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026393413.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS342.66.8e-1051355113374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL+e+A+a++++++e++q+l++ l+el+sp+gd+ q+la+yf++AL  r+++s++++y++l++ ++++ + +++ +++  f+evsP+ +f+h++
  XP_026393413.1 135 NLLVEAARAIADRNKERVQQLMWMLNELSSPYGDTDQKLASYFLQALFCRMTDSGERCYRTLRSASEKTCSFESTRKVVLKFQEVSPWTTFGHVA 229
                     69************************************************************9888887666666677777************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvlvak.rled 188
                      N aI+ea+ege ++HiiD++ ++++QWp+Ll+aLa+R++++p+lR+T++ s++ g    ++ ++e+g r++kfA+ +gvpf+fnv++++ +l++
  XP_026393413.1 230 SNGAIMEAFEGEAKLHIIDISNTYCTQWPTLLEALATRTDDTPHLRLTTIISSAVGtaaVQRVMKEIGTRMEKFARLMGVPFKFNVIHHSgDLSE 324
                     **************************************************997777899999************************988789999 PP

            GRAS 189 le.leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsleaklpre 278
                     l+ + eL++k +Eala+n+   lh++     ++ ++r++vL+++++l+Pk+++vve+ead++ +    +F+++f e+l+y+ + f++l++++ ++
  XP_026393413.1 325 LSfIPELDLKDDEALAINCNGTLHTIG----DVGNQRNTVLSAFRTLNPKIITVVEEEADLDIGvdgfEFVKGFQESLRYFRVYFEALDESFTKT 415
                     973579********************7....66667779*******************99865555669************************** PP

            GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSa 372
                     s+er ++Er+  gr++v+++ac   ++ er+e++++W++rl++ GF+++ +s+++ +++k+llr++k ++ ++ +++++ ++l Wkd+p+v++Sa
  XP_026393413.1 416 SNERLMLERV-AGRALVDLLACPIGASSERRESAARWSHRLRATGFNSLGYSDDVSDDVKALLRRYKeGWSMTQNSDHAGIFLAWKDQPVVWASA 509
                     *********9.********************************************************656566667888999************* PP

            GRAS 373 Wr 374
                     W+
  XP_026393413.1 510 WK 511
                     *8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 512 aa     Download sequence    
MDTLFRLVSL QQSDQSINTT TTASTRTTST TSRSSNSRQS FNNNNNTHCY QNYTSIQEEE  60
CSNFFMDEDN FSSSSSAKQH LYPSPSSAYH PHQQQQHTPT STTSSHENQF INYQNQQPIL  120
QDLSLDLSSS KWSCNLLVEA ARAIADRNKE RVQQLMWMLN ELSSPYGDTD QKLASYFLQA  180
LFCRMTDSGE RCYRTLRSAS EKTCSFESTR KVVLKFQEVS PWTTFGHVAS NGAIMEAFEG  240
EAKLHIIDIS NTYCTQWPTL LEALATRTDD TPHLRLTTII SSAVGTAAVQ RVMKEIGTRM  300
EKFARLMGVP FKFNVIHHSG DLSELSFIPE LDLKDDEALA INCNGTLHTI GDVGNQRNTV  360
LSAFRTLNPK IITVVEEEAD LDIGVDGFEF VKGFQESLRY FRVYFEALDE SFTKTSNERL  420
MLERVAGRAL VDLLACPIGA SSERRESAAR WSHRLRATGF NSLGYSDDVS DDVKALLRRY  480
KEGWSMTQNS DHAGIFLAWK DQPVVWASAW KP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.10.0GRAS family protein