PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026393332.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 378aa    MW: 40443.7 Da    PI: 6.6748
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026393332.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12e-10218266355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_026393332.1 218 NSHSLAERVRREKISERMKLLQDLVPGC----NKITGKAVMLDEIINYVQSLQ 266
                     58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MSLGETSSGG GGNSYFGTGW DPMLSLAHSG GGPSMASQHH QIPISPYGMY GNQGGHPVQF  60
PNDPRFIGSG PKLPCFGSGN FSEIAGSFGG SERSQIANSG CPSNYTSNKD GIAENNSRNS  120
SPDGNKRKRV PDYNSSKSPQ GQFSSVQNET DAEQQKDVSE GGLDDSNEQN DKKSKAGKNP  180
ATSSRGNSNG KAKDNSQDGQ APKDDCVHLR ARRGQATNSH SLAERVRREK ISERMKLLQD  240
LVPGCNKITG KAVMLDEIIN YVQSLQQQVE FLSMKLATVN PEVNFDIDQI LSKDILHSRS  300
LGAALHGFGP GATSSLHPSL NPLAGMQALQ CTNPQLPNMS QAPPNTWEDE LQSMIQMGLI  360
SNQALENMGL SGHMKLEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.17e-69bHLH family protein