PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026391579.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ERF

Protein Properties

Length: 490aa MW: 53788.8 Da PI: 8.0706

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026391579.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	64.7	1.8e-20	271	320	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f+tae Aa+a+++a+++++g XP_026391579.1 271 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAESAARAYDEAALRFRG 320 7******.******7.....337***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MLKVANSSRK PSDTSSEYVG YNTNMQQQAG GGTNDQGRIR RVGSNQRQQQ QQQQQEQDQQ 60 EQQQHQQDYV TESAGMTMFS ENYSNTREMS AMVSALTQVV SGTTGDHHHW LNNYGSPTSD 120 LSAHLISSTS NNNNTNTVSV SSPSSSSYSS NTSWGGNTNT TPTHGGLKRE REDDHHQINI 180 NISAGHRGGN GGGDGGMIRS NFRGGFIADF KSSPGESSSG KSGSPDGPSN TTSTNIVTST 240 DQTTTTSSST PRVKDQQQNN PEEVVVERRR RYRGVRQRPW GKWAAEIRDP HKAARVWLGT 300 FDTAESAARA YDEAALRFRG NRAKLNFPEN VSLRPTISVS PTTHFSSVSD SQSTLSPVVQ 360 NQSSTSSTFI QSPLGLHHLQ SSSSNINRDF IQYTQLLQNS ENNPFFQIQQ LQQNPYEKML 420 YPSQSSFPFQ SSSTSSSIPY SVFQTNNQHS GYFRPPENSN QGGGGNGSDY PTYSWMNSSH 480 YAPPPPPPPS

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MLKVANSSRK PSDTSSEYVG YNTNMQQQAG GGTNDQGRIR RVGSNQRQQQ QQQQQEQDQQ  60
EQQQHQQDYV TESAGMTMFS ENYSNTREMS AMVSALTQVV SGTTGDHHHW LNNYGSPTSD  120
LSAHLISSTS NNNNTNTVSV SSPSSSSYSS NTSWGGNTNT TPTHGGLKRE REDDHHQINI  180
NISAGHRGGN GGGDGGMIRS NFRGGFIADF KSSPGESSSG KSGSPDGPSN TTSTNIVTST  240
DQTTTTSSST PRVKDQQQNN PEEVVVERRR RYRGVRQRPW GKWAAEIRDP HKAARVWLGT  300
FDTAESAARA YDEAALRFRG NRAKLNFPEN VSLRPTISVS PTTHFSSVSD SQSTLSPVVQ  360
NQSSTSSTFI QSPLGLHHLQ SSSSNINRDF IQYTQLLQNS ENNPFFQIQQ LQQNPYEKML  420
YPSQSSFPFQ SSSTSSSIPY SVFQTNNQHS GYFRPPENSN QGGGGNGSDY PTYSWMNSSH  480
YAPPPPPPPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	267	272	ERRRRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64750.1	2e-22	ERF family protein