PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390951.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 378aa    MW: 40603.9 Da    PI: 6.6723
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12e-10219267355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_026390951.1 219 NSHSLAERVRREKISERMKLLQDLVPGC----NKITGKAVMLDEIINYVQSLQ 267
                     58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MSLGETSSGG GGNSYFGTCW DPMLSLAHSG GGPSMASQHH QIPISPYGMY GNQGGHPVQF  60
PNDPRFIGLA PKLPCFGSGN FSEIAGSFGG SERSQIANSG CPSNYTSNKD GIAENNSRNS  120
SPDGNKRKRV PDYNSSKSPQ GQFSSVQNET DTEQQKDVSE GGLDDSNEQN DKKSKAGKNP  180
ATSSRGNSNG KQAKDNSQDG QAPKDDCVHL RARRGQATNS HSLAERVRRE KISERMKLLQ  240
DLVPGCNKIT GKAVMLDEII NYVQSLQQQV EFLSMKLATV NPEVNFDIDQ ILSKDILHSR  300
SLGAALHGFG PGATSSLHPS LNPLAGMQAL QCTNPQLPNM SQAPNTWEDE LQSMIQMGLI  360
SNQALENMGL NGHMKVEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.11e-70bHLH family protein