PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390626.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 289aa    MW: 30921.4 Da    PI: 9.5416
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390626.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.90.00021772151154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      R ++i ++++ L++l+ +      +K + a++L +A+ YI+ L
  XP_026390626.1 177 VRKEKIGERIAALQQLVSPF-----GKTDTASVLHEAMGYIRFL 215
                     6888999***********98.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MGTNESFDHE DSLSSYSQLL DSTSQDMEQS FMYSTFHSSP KPPTMLCFGN VNNNNTSISS  60
INNNKKKLDE ELGFVDRGNK VIQKSGITGG SDSSSASSSN NSSSSNSITK SKRGQIGNLR  120
QTEQEDRESG YGSNNPIPIP GLGSSTNSQT TKRTTTTTTN KKPKKETPPS VGAPVKVRKE  180
KIGERIAALQ QLVSPFGKTD TASVLHEAMG YIRFLHDQVQ VLSSPYLQKL PLSGPFAEGG  240
RRAAAGIGTG LKTRGLCLVP IEYTLHVANC NGADLWSPAA AMGNIKNAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.12e-39bHLH family protein