PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390500.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 317aa    MW: 35411.4 Da    PI: 9.2614
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390500.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA62.93.7e-20184218135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nC tt+TplWR+gp+g+k+LCnaCG++y+k+++
  XP_026390500.1 184 CANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEER 218
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MQRCSSNTSS YQYCSHHPVG TCSCHLYQPH HHHHQSTSSS HQPSSGKNPF TMLFSSSSNT  60
KSCSTQYSNP NNQNSKSFDE LDYHSYPIIT SSSPSSAVDC TLSLGTPSTR KTNNSVMIDN  120
HRKSTSCLTS SSKYCKSWDV FQPNSKNHHQ EQQRHTSSTA HNIKNIISRG YNSVNRDQTI  180
GRRCANCDTT STPLWRNGPR GPKSLCNACG IRYKKEERRA TASTTTTSNV NVNGAVGEVM  240
SHPNQQSWAP HHSQTQPRLS TSAYPTSSTT SHYHEFRFIG DDDRYHHHSN TNTSSTGSGG  300
IPNFLSWRQP TLVHHYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.11e-27GATA family protein