PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026390431.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 237aa MW: 26372.9 Da PI: 9.657 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 71.6 | 6.7e-23 | 17 | 65 | 1 | 49 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 krie + rqvtfskRr g++KKA+EL++LC+ae+a+i+fs+ gk + + XP_026390431.1 17 KRIEKEDARQVTFSKRRGGLIKKAHELCTLCGAEIAIIVFSPAGKPFSF 65 79******************************************97666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MAVTRKPSMG RQKIEIKRIE KEDARQVTFS KRRGGLIKKA HELCTLCGAE IAIIVFSPAG 60 KPFSFIHPES VIDRYLSGNS LQENMTPTPL VSAHRDAKIR ELNKEYTEAL NKLEAEKKRG 120 AALKKMKKAS RKQFWWDPID DLGVHELEQL SSAIDELKNQ VAERADELLL GSSSSMSFLP 180 GNNSSNGMSS TSHSEYSSTT TYETKPAIPN HQILTSSLPH HGSYGTGFGF YGRNGLY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24840.1 | 6e-38 | M-type_MADS family protein |