PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026389545.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family YABBY
Protein Properties Length: 230aa    MW: 25593.9 Da    PI: 7.9229
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026389545.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY233.54.9e-72101892170
           YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasq.llaaeshldeslkee..........lleelkv.eeenlks 84 
                     d+ s seq+Cyv+Cn C+t+lavsvP +sl+k+vtvrCGhCt+llsvn++     + + + hl++++ ++          l+ee  + +  nl  
  XP_026389545.1  10 DHLSPSEQLCYVHCNLCDTVLAVSVPCSSLYKTVTVRCGHCTNLLSVNMRGLLLpAASNQLHLGHAFFPPppppppthhnLMEEISNlQPPNL-L 103
                     67899*****************************************999988751445566999999998999***76664444333033333.3 PP

           YABBY  85 nvekeesastsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     +++++++++ ++s+      +++++pr+p +++PPekrqrvPsaynrfik+eiqrika+nPdi+hr+afsaaaknWahfP+ihfgl
  XP_026389545.1 104 MDQQQHNPNYNESTIPRGGIHQDDLPRQPVANKPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHRQAFSAAAKNWAHFPHIHFGL 189
                     44445555555555566888999*************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MSSSSAFSLD HLSPSEQLCY VHCNLCDTVL AVSVPCSSLY KTVTVRCGHC TNLLSVNMRG  60
LLLPAASNQL HLGHAFFPPP PPPPPTHHNL MEEISNLQPP NLLMDQQQHN PNYNESTIPR  120
GGIHQDDLPR QPVANKPPEK RQRVPSAYNR FIKDEIQRIK AGNPDITHRQ AFSAAAKNWA  180
HFPHIHFGLM PDQTAGKKNN VRQQDGEDVP FKDGFFTAAN NNQQLGVSPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.12e-76YABBY family protein