PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026389298.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 274aa MW: 30125.2 Da PI: 8.4989

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026389298.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.4	0.001	208	230	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp C Fs+ L+ H ++ H XP_026389298.1 208 ECPQCRAKFSSVTALVEHVKKnH 230 5*******************999 PP
2	zf-C2H2	17.2	1.5e-05	246	268	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp+C++ F+++ L++H + H XP_026389298.1 246 VCPKCSRGFRDPVALVNHVEKdH 268 7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MGTPEFPDLG KHCTVEDCKL IDFLPFTCDR CNQVYCLEHR SFVKHQCPNA NKQDVTVVIC 60 PLCAKGVRLI PDEDPNITWE THVNTECDPS NYEKATKKKK CPVPRCKENL TFSNTIKCRD 120 CTIEHCLKHR FGPDHQCPGP KKATSGFPFV NLLNKSQKDG TKLGRNSSST SSSPTWVTGL 180 MNAASSVKAS FKTATDGIGQ SSSGQTEECP QCRAKFSSVT ALVEHVKKNH ERGNRSGGAN 240 KVTIDVCPKC SRGFRDPVAL VNHVEKDHGG TSRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	1e-122	C2H2 family protein