PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026388489.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 403aa    MW: 44751.6 Da    PI: 6.1149
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026388489.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.92e-09254302355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_026388489.1 254 NSHSLAERVRREKISERMKLLQDLVPGC----DKVTGKALMLDEIINYVQSLQ 302
                     58*************************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MCTNLQTEKV VEEMSMNQIS ISKSTHEVDS FFHTGWNPLV TLPQTMEFKG SLLDSHHQIG  60
IPSLNVDLLE NQRIGNSPHL VLYPSDPNLV GLEPKLPSFG SGSFIEMLAP FCIPESHQLV  120
HADSLPGYPS NKVNTVNPTS TSGKVADHGV IFQEEVPVAN DCGRKPLYNG KKRKRVMDNP  180
TGDTHSQLNS TQSMETEQQM VTPIETSEDL KGQNERKQRN KQNPSSEPKD SSQNEEALKE  240
DYVHVRARRG QATNSHSLAE RVRREKISER MKLLQDLVPG CDKVTGKALM LDEIINYVQS  300
LQRQVEFLSM KLATVNPDIN ADIERIMSKD ILHSRAGGSA ILGFAPGVNS SHSQAMPHLF  360
HQAMLPMQST DVLPLSAPQM SSVWVNDDEL QSVLQMGSTK VEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.11e-61bHLH family protein