PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026388128.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ZF-HD

Protein Properties

Length: 382aa MW: 42913.6 Da PI: 9.4248

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026388128.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	98.8	4.1e-31	83	139	3	58
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58 +v+YkeC+kNhAas+Ggha DGCgEfm++ +++ ++a++l+CaACgCHRnFHR+e + XP_026388128.1 83 QVKYKECMKNHAASIGGHANDGCGEFMQEADQDnNNARSLRCAACGCHRNFHRKEIH 139 799************************9999899****************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MNLSMVPYSK QVIMAGGDQD NNKKGSSSNE VIDIKPVVEE INCNDSRRFG IINLAEPLLE 60 PIVVKPVTSN SSNMKQHHSS KFQVKYKECM KNHAASIGGH ANDGCGEFMQ EADQDNNNAR 120 SLRCAACGCH RNFHRKEIHG SGFVDHLQQQ QQPIVNYNGT NPRYEKTKKH HHHHQSRGGF 180 NSLPSLSLPQ VHNNNQQFLV QHRSSKNNSP INNNNIRDAL FGDDDDNTTT MDYNNEDRRS 240 ETPEERVGMM RNGGSSSNNG SSNKRFRTKF SQEQKDKMLD FADKIGWRIQ KQDDNALNQF 300 CLEIGVKRQV LKVWMHNNKN TLRKPQFLGT PPSSAALPTS SSVPAAAPVV MQLQSPPSPS 360 SPAAQHHQHH HQQQHPRSIN GV

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MNLSMVPYSK QVIMAGGDQD NNKKGSSSNE VIDIKPVVEE INCNDSRRFG IINLAEPLLE  60
PIVVKPVTSN SSNMKQHHSS KFQVKYKECM KNHAASIGGH ANDGCGEFMQ EADQDNNNAR  120
SLRCAACGCH RNFHRKEIHG SGFVDHLQQQ QQPIVNYNGT NPRYEKTKKH HHHHQSRGGF  180
NSLPSLSLPQ VHNNNQQFLV QHRSSKNNSP INNNNIRDAL FGDDDDNTTT MDYNNEDRRS  240
ETPEERVGMM RNGGSSSNNG SSNKRFRTKF SQEQKDKMLD FADKIGWRIQ KQDDNALNQF  300
CLEIGVKRQV LKVWMHNNKN TLRKPQFLGT PPSSAALPTS SSVPAAAPVV MQLQSPPSPS  360
SPAAQHHQHH HQQQHPRSIN GV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24660.1	1e-26	ZF-HD family protein