PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026386235.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 441aa MW: 48310.9 Da PI: 7.0866

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026386235.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.4	1.2e-38	79	260	2	116
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLl qa+pa++++tgt++++a+++ + s +ss+s+ s++ XP_026386235.1 79 PPKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLHQAEPAVIAATGTGTIPANFTsLNISLRSSGSTMSAPlrssyfn 173 789******************************************************************99988888888888666667788888 PP TCP 89 .............................................kaaksaakskksqksaasalnlakesr..............a 116 + ++s++++++s+++ +++l+ ++e r XP_026386235.1 174 pnfalttnpqlrirsewernidesssrllfpggldsnnsststllNFQNSSHNNNNSNSNVNQMLQAKQELRdvpcldmsvdtdlgR 260 888899999999999999999999999999999987654444444333333334444444444444444444666666666553333 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MIMEGENGLR RPNFPLQLLE KKEEDMCSSS GYPSLGISST ETNSTNNFRG ASNNSSTIQT 60 ISENNLSSST SSAVVKKPPP KRTSTKDRHT KVDGRGRRIR MPATCAARVF QLTRELGHKS 120 DGETIEWLLH QAEPAVIAAT GTGTIPANFT SLNISLRSSG STMSAPLRSS YFNPNFALTT 180 NPQLRIRSEW ERNIDESSSR LLFPGGLDSN NSSTSTLLNF QNSSHNNNNS NSNVNQMLQA 240 KQELRDVPCL DMSVDTDLGR KRRSEQHEED PSSQQQHQQN LHQFGNYFLQ SSSTGSIPAS 300 QIPSGGTVWM VQNPNTNNQV MSGDPIWTFP SVSNPTMYRG SMSSGLHFMN FPPPMALLSS 360 HQQLGAGLLA TSTTSNNTNG SGSTTTHEGH LGMLAALNAY RAWPNMGISD QHHHQQATES 420 DQSPHSHHEG NERHDSADHH S

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MIMEGENGLR RPNFPLQLLE KKEEDMCSSS GYPSLGISST ETNSTNNFRG ASNNSSTIQT  60
ISENNLSSST SSAVVKKPPP KRTSTKDRHT KVDGRGRRIR MPATCAARVF QLTRELGHKS  120
DGETIEWLLH QAEPAVIAAT GTGTIPANFT SLNISLRSSG STMSAPLRSS YFNPNFALTT  180
NPQLRIRSEW ERNIDESSSR LLFPGGLDSN NSSTSTLLNF QNSSHNNNNS NSNVNQMLQA  240
KQELRDVPCL DMSVDTDLGR KRRSEQHEED PSSQQQHQQN LHQFGNYFLQ SSSTGSIPAS  300
QIPSGGTVWM VQNPNTNNQV MSGDPIWTFP SVSNPTMYRG SMSSGLHFMN FPPPMALLSS  360
HQQLGAGLLA TSTTSNNTNG SGSTTTHEGH LGMLAALNAY RAWPNMGISD QHHHQQATES  420
DQSPHSHHEG NERHDSADHH S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	3e-46	TCP family protein