PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026386196.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ZF-HD

Protein Properties

Length: 356aa MW: 38642.6 Da PI: 8.5178

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026386196.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	104	9.5e-33	46	102	4	59
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 v+Y+eClkNhAaslGg ++DGCgEfmps++++ +++++lkCaAC+CHRnFHRr++ee XP_026386196.1 46 VVYRECLKNHAASLGGRSLDGCGEFMPSPNTNlSDPTSLKCAACNCHRNFHRRDPEE 102 89***************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MDSAIKTPPS DTEVVITTPP PTKSFTNGVL KRHHHHQPQP TSAAIVVYRE CLKNHAASLG 60 GRSLDGCGEF MPSPNTNLSD PTSLKCAACN CHRNFHRRDP EEGTHIIEYR HHQAPPVLPI 120 PQQQQPGDQE GGNVSPSSSD SPPPISSAYN YPNSSAPHML LALRTGGLPG VPSDNNHQMM 180 MAGGKMSTTT TTTIGGLTSP NTNGNVSNGS GRKRIRTKFS QEQKDKMYLF SERLGWKLQK 240 RDEGIIDEFC NEIGVERGIL KVWMHNNKHT FGKIRDSSTT PSTITTTSAP HVTSLNNNNN 300 NHHQNHHPHQ NQPQNQNHHY NNGGGGGGVG SGGGSVLHHN HHHEVQVTAN CSSSSS

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MDSAIKTPPS DTEVVITTPP PTKSFTNGVL KRHHHHQPQP TSAAIVVYRE CLKNHAASLG  60
GRSLDGCGEF MPSPNTNLSD PTSLKCAACN CHRNFHRRDP EEGTHIIEYR HHQAPPVLPI  120
PQQQQPGDQE GGNVSPSSSD SPPPISSAYN YPNSSAPHML LALRTGGLPG VPSDNNHQMM  180
MAGGKMSTTT TTTIGGLTSP NTNGNVSNGS GRKRIRTKFS QEQKDKMYLF SERLGWKLQK  240
RDEGIIDEFC NEIGVERGIL KVWMHNNKHT FGKIRDSSTT PSTITTTSAP HVTSLNNNNN  300
NHHQNHHPHQ NQPQNQNHHY NNGGGGGGVG SGGGSVLHHN HHHEVQVTAN CSSSSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69600.1	6e-55	ZF-HD family protein