PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026386060.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HSF

Protein Properties

Length: 451aa MW: 51315.2 Da PI: 5.3714

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026386060.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.9	2.4e-36	14	104	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye+++d+++++++sws+++nsf+v+++ efa+++LpkyFkh+nf+SF+RQLn+YgF+k + ++ weF++++F +g+k+ll++ XP_026386060.1 14 FLTKTYEMIDDPATDSVVSWSQTNNSFIVWNPPEFARDLLPKYFKHNNFSSFIRQLNTYGFRKADPDQ---------WEFANEEFIRGQKHLLKN 99 9*************************************************************9998.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_026386060.1 100 IHRRK 104 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MDGSQGGTNS PPPFLTKTYE MIDDPATDSV VSWSQTNNSF IVWNPPEFAR DLLPKYFKHN 60 NFSSFIRQLN TYGFRKADPD QWEFANEEFI RGQKHLLKNI HRRKPIHSHS LNNHQGQGSS 120 SGSLSELEKQ EFEEEIEKLK HDKSSLVFEL QKHTQEQQVM EVQMQSIEER LYVMEKRQRQ 180 LMAFLAQTMG KPGFVSNLIQ QSEKHNKRRR LTKPDYFHDE ADKEETRIVV FKPVAAEDSD 240 LIAFPVVNRE PLEKMESTMN SLETFLCAVG QVSGEEMRNT AVPSQPSAVF SNEINTSSGE 300 PDIGLQPPSP RLHLSSSCSR DIHSSPELAE SISNVESRII SAIQLVVDVR PNESGIHVNS 360 RPATSPEVYS AKEPKVGTTA PVLTGVNDVF WEQFLTETPG SSDTPEVQSE RRDIDERNTS 420 KPVDRGRFWW NMKNIDNLTE QMGHLTQAEK T

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MDGSQGGTNS PPPFLTKTYE MIDDPATDSV VSWSQTNNSF IVWNPPEFAR DLLPKYFKHN  60
NFSSFIRQLN TYGFRKADPD QWEFANEEFI RGQKHLLKNI HRRKPIHSHS LNNHQGQGSS  120
SGSLSELEKQ EFEEEIEKLK HDKSSLVFEL QKHTQEQQVM EVQMQSIEER LYVMEKRQRQ  180
LMAFLAQTMG KPGFVSNLIQ QSEKHNKRRR LTKPDYFHDE ADKEETRIVV FKPVAAEDSD  240
LIAFPVVNRE PLEKMESTMN SLETFLCAVG QVSGEEMRNT AVPSQPSAVF SNEINTSSGE  300
PDIGLQPPSP RLHLSSSCSR DIHSSPELAE SISNVESRII SAIQLVVDVR PNESGIHVNS  360
RPATSPEVYS AKEPKVGTTA PVLTGVNDVF WEQFLTETPG SSDTPEVQSE RRDIDERNTS  420
KPVDRGRFWW NMKNIDNLTE QMGHLTQAEK T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	207	211	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	2e-80	HSF family protein