PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026385870.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 338aa MW: 38282.6 Da PI: 7.3569 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.8 | 2.2e-09 | 193 | 240 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_026385870.1 193 SHSLAERVRREKISERMKLLQSLVPGC----DKVTGKALMLDEIINYVQSLQ 240 8*************************9....555*****************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 338 aa Download sequence |
MAAYSYLHPT LFLDSANFLI QNTTATTNHH HNPVMMMSAG SSFEEQACHD IINSNTSLSY 60 FPSADNYQPL HDLVVFHNNQ ETSSGEENNS RSSSDTDQSL TTNDNNIHNQ ETKTTEKKRK 120 NTTANDRSSR EGSCLSSGVS KNLKEVKTKK QRKCVKETTE EKKKKKKESQ KIEEPPTSGY 180 IHVRARRGQA TDSHSLAERV RREKISERMK LLQSLVPGCD KVTGKALMLD EIINYVQSLQ 240 NQVEFLSMKL ASVNPIFYDY GVDLDALLKQ NYSPGSIPLP SNDQQYNSSA LFQQSHILPN 300 SFSQCNENNL LMDMDREQRE RASTIISQSL FNHLCSFQ |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 117 | 153 | KKRKNTTANDRSSREGSCLSSGVSKNLKEVKTKKQRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G50915.2 | 5e-52 | bHLH family protein |