PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026385641.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 542aa MW: 59081.9 Da PI: 7.7382

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026385641.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48	3.2e-15	91	139	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GV + rg+W A I+d +k+++lg+f taeeAa a+++ + +l+g XP_026385641.1 91 KKYRGVKQQQ-RGKWGAVIKDR-----CKSIWLGTFNTAEEAAIAYDREAMRLKG 139 59***988.8*****5.....6********************99988 PP
2	AP2	41.6	3.1e-13	310	358	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GV + +g+W A I+d +k+ +lg f +aeeAa a+++ + +++g XP_026385641.1 310 KKYRGVKQQQ-QGKWGAVIKDR-----CKSLWLGIFNSAEEAAIAYDREAIRIRG 358 59**9988.9*****5.....6**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MHNQNQNRQW LPNVIFPGKA AELYLQALGI AMVRTVRVKR NITEITIEEN ITLSVDAPNG 60 NGILEKEICG EKKKKSSDPF LNSVANGGGA KKYRGVKQQQ RGKWGAVIKD RCKSIWLGTF 120 NTAEEAAIAY DREAMRLKGP NAVTNFVYAQ PEPEPPVLAE CHLPPESSRV VFASSGDCNS 180 QGSQVAAYIS MISPSQPALN HIFGQTTCTQ EELLSQGFSG YLPPSFTALQ TICSAEAEKG 240 QKLPVPEEID ISLKSRVKRN ITEITIEENI TLSANAPNGN RILEKEICGE KKKKSSDPFL 300 NSVANGGGAK KYRGVKQQQQ GKWGAVIKDR CKSLWLGIFN SAEEAAIAYD REAIRIRGPN 360 AVTNFFYAQP EPEPPVVAEF RLPQESSRAV FAISGDCNGQ GSQESLADSK EIGTSSETNL 420 QSEISIPSEF NYSNGPCYRV DEVKAPTESF MEVTFSSKSL PVASYTSELP ADLACSPKMP 480 QVAKPYQTTI TDTHMLSAVA AAPKTLPFSN YSFGKITCSH ENYSAKALKS FVVPCLPATL 540 QC

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MHNQNQNRQW LPNVIFPGKA AELYLQALGI AMVRTVRVKR NITEITIEEN ITLSVDAPNG  60
NGILEKEICG EKKKKSSDPF LNSVANGGGA KKYRGVKQQQ RGKWGAVIKD RCKSIWLGTF  120
NTAEEAAIAY DREAMRLKGP NAVTNFVYAQ PEPEPPVLAE CHLPPESSRV VFASSGDCNS  180
QGSQVAAYIS MISPSQPALN HIFGQTTCTQ EELLSQGFSG YLPPSFTALQ TICSAEAEKG  240
QKLPVPEEID ISLKSRVKRN ITEITIEENI TLSANAPNGN RILEKEICGE KKKKSSDPFL  300
NSVANGGGAK KYRGVKQQQQ GKWGAVIKDR CKSLWLGIFN SAEEAAIAYD REAIRIRGPN  360
AVTNFFYAQP EPEPPVVAEF RLPQESSRAV FAISGDCNGQ GSQESLADSK EIGTSSETNL  420
QSEISIPSEF NYSNGPCYRV DEVKAPTESF MEVTFSSKSL PVASYTSELP ADLACSPKMP  480
QVAKPYQTTI TDTHMLSAVA AAPKTLPFSN YSFGKITCSH ENYSAKALKS FVVPCLPATL  540
QC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27950.1	2e-22	ERF family protein