PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026385640.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 548aa MW: 59782.8 Da PI: 7.7486

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026385640.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48	3.2e-15	91	139	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GV + rg+W A I+d +k+++lg+f taeeAa a+++ + +l+g XP_026385640.1 91 KKYRGVKQQQ-RGKWGAVIKDR-----CKSIWLGTFNTAEEAAIAYDREAMRLKG 139 59***988.8*****5.....6********************99988 PP
2	AP2	41.6	3.1e-13	316	364	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GV + +g+W A I+d +k+ +lg f +aeeAa a+++ + +++g XP_026385640.1 316 KKYRGVKQQQ-QGKWGAVIKDR-----CKSLWLGIFNSAEEAAIAYDREAIRIRG 364 59**9988.9*****5.....6**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 548 aa Download sequence
MHNQNQNRQW LPNVIFPGKA AELYLQALGI AMVRTVRVKR NITEITIEEN ITLSVDAPNG 60 NGILEKEICG EKKKKSSDPF LNSVANGGGA KKYRGVKQQQ RGKWGAVIKD RCKSIWLGTF 120 NTAEEAAIAY DREAMRLKGP NAVTNFVYAQ PEPEPPVLAE CHLPPESSRV VFASSGDCNS 180 QGSQVAAYIS MISPSQPALN HIFGQTTCTQ EELLSQGFSG YLPPSFTALQ TICSAEAEKG 240 HVFFIGQKLP VPEEIDISLK SRVKRNITEI TIEENITLSA NAPNGNRILE KEICGEKKKK 300 SSDPFLNSVA NGGGAKKYRG VKQQQQGKWG AVIKDRCKSL WLGIFNSAEE AAIAYDREAI 360 RIRGPNAVTN FFYAQPEPEP PVVAEFRLPQ ESSRAVFAIS GDCNGQGSQE SLADSKEIGT 420 SSETNLQSEI SIPSEFNYSN GPCYRVDEVK APTESFMEVT FSSKSLPVAS YTSELPADLA 480 CSPKMPQVAK PYQTTITDTH MLSAVAAAPK TLPFSNYSFG KITCSHENYS AKALKSFVVP 540 CLPATLQC

Sequence ? help Back to Top

Protein Sequence Length: 548 aa Download sequence

MHNQNQNRQW LPNVIFPGKA AELYLQALGI AMVRTVRVKR NITEITIEEN ITLSVDAPNG  60
NGILEKEICG EKKKKSSDPF LNSVANGGGA KKYRGVKQQQ RGKWGAVIKD RCKSIWLGTF  120
NTAEEAAIAY DREAMRLKGP NAVTNFVYAQ PEPEPPVLAE CHLPPESSRV VFASSGDCNS  180
QGSQVAAYIS MISPSQPALN HIFGQTTCTQ EELLSQGFSG YLPPSFTALQ TICSAEAEKG  240
HVFFIGQKLP VPEEIDISLK SRVKRNITEI TIEENITLSA NAPNGNRILE KEICGEKKKK  300
SSDPFLNSVA NGGGAKKYRG VKQQQQGKWG AVIKDRCKSL WLGIFNSAEE AAIAYDREAI  360
RIRGPNAVTN FFYAQPEPEP PVVAEFRLPQ ESSRAVFAIS GDCNGQGSQE SLADSKEIGT  420
SSETNLQSEI SIPSEFNYSN GPCYRVDEVK APTESFMEVT FSSKSLPVAS YTSELPADLA  480
CSPKMPQVAK PYQTTITDTH MLSAVAAAPK TLPFSNYSFG KITCSHENYS AKALKSFVVP  540
CLPATLQC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27950.1	2e-22	ERF family protein