PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026385488.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 270aa MW: 30976 Da PI: 8.9647

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026385488.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15	7e-05	94	116	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+++F+++ +L H + H XP_026385488.1 94 SCSVCSRVFPTSRLLSIHVSEaH 116 6*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MAMVAERNEL GFPYWNPVSR KFRPDSPFFA SGNIERELLA KQVALDITED EMYQLQDMED 60 EESRALYCPI VGCGARLNSL EDFEGHYHAR HTASCSVCSR VFPTSRLLSI HVSEAHDSFF 120 QAKVARGYLM YECLVEGCEM KLKSYKSRQQ HLVDKHKFPM SFEFFKKAQA SKKHRQKKHH 180 KQKQPDKKNS NKISKKDVKE DDTEAEAEAS KMDVDKTIDS LVSGVSRLST SDDSPSSVSF 240 GRRRNQVFTF VPRAVQQDRK HNPSVKGSEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14140.1	3e-95	C2H2 family protein