PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026384954.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 438aa MW: 49275.6 Da PI: 6.7273

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026384954.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	66.2	5.6e-21	114	167	1	55
G2-like 1 kprlrWt.peLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ W+ peLH++Fvea +LG +kA+P++il m+v+gLt+e+v+SHLQkYR XP_026384954.1 114 KTRISWAdPELHAKFVEAFYKLG--DKAVPSKILAEMNVQGLTREKVASHLQKYRK 167 6899758*********4..89**************************5 PP
2	Myb_DNA-binding	30.2	1.1e-09	122	166	6	48
HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 +e++ ++v+a+ +lG + +++I ++m+ +g+t++ + s++qky+ XP_026384954.1 122 PELHAKFVEAFYKLGDKaVPSKILAEMNvQGLTREKVASHLQKYR 166 8************99*************************7 PP
3	Response_reg	32.1	5.9e-12	1	56	53	109
CTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 53 mpgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 m +m+G+ellk+i e ++p+i+++++g+ e++ + ++ Ga d+l+Kp + +e+ + XP_026384954.1 1 MDEMNGFELLKTIGLEM-DIPVIMMSTSGDYETVMKGIEHGACDYLVKPPSLKEIQN 56 889********6654.8****************************98888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MDEMNGFELL KTIGLEMDIP VIMMSTSGDY ETVMKGIEHG ACDYLVKPPS LKEIQNIWQH 60 VVRLKKNKST LSDPDTEKKG TERNLKRRNN NQTKSNEDED SSHSSDELLP NQKKTRISWA 120 DPELHAKFVE AFYKLGDKAV PSKILAEMNV QGLTREKVAS HLQKYRKIME KQSKKPNSIT 180 TFNGMSGRLR NSTFPSLLNL QFQNGRNYLS SSQSYHRGTN QLSHYGVTPN PSNRSFVNPH 240 PHFLPSTQPY TSQYSSTLGT INQNPQKIQV SDSTMHNLHN QTYASGLNAQ TFSSSSKLFD 300 PHMVSSSKFP DYNANIHSGT SNFQFGEASN VLANNNLFDD LTYYSMLDHA SSSNLNTVFQ 360 SDYTFNMTHS TLSGYDDGMR NMVAPTIPST NVMESQSVDQ IPSLENPLAF LETDSDHLGS 420 YSFADDDLSA AIRPYQQQ

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MDEMNGFELL KTIGLEMDIP VIMMSTSGDY ETVMKGIEHG ACDYLVKPPS LKEIQNIWQH  60
VVRLKKNKST LSDPDTEKKG TERNLKRRNN NQTKSNEDED SSHSSDELLP NQKKTRISWA  120
DPELHAKFVE AFYKLGDKAV PSKILAEMNV QGLTREKVAS HLQKYRKIME KQSKKPNSIT  180
TFNGMSGRLR NSTFPSLLNL QFQNGRNYLS SSQSYHRGTN QLSHYGVTPN PSNRSFVNPH  240
PHFLPSTQPY TSQYSSTLGT INQNPQKIQV SDSTMHNLHN QTYASGLNAQ TFSSSSKLFD  300
PHMVSSSKFP DYNANIHSGT SNFQFGEASN VLANNNLFDD LTYYSMLDHA SSSNLNTVFQ  360
SDYTFNMTHS TLSGYDDGMR NMVAPTIPST NVMESQSVDQ IPSLENPLAF LETDSDHLGS  420
YSFADDDLSA AIRPYQQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58080.1	2e-40	ARR-B family protein