PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026384280.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 673aa MW: 76533.9 Da PI: 8.4054

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026384280.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.4	3.2e-08	484	524	2	39
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkq 39 ++W++eE ell ++++++++g +W+ I++++g+gR+ + XP_026384280.1 484 KPWSKEEVELLRKGIQKFPKGtsrRWEVISEYIGTGRSVDE 524 58**********************************99765 PP
2	Myb_DNA-binding	25.6	2.9e-08	618	662	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +W++ + lv+a k ++++ +W +I++ ++ g+t qck ++ XP_026384280.1 618 AWSAVQERALVQALKTFPKEtnqRWQRISAAVP-GKTVVQCKKKFA 662 7******************************.******9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 673 aa Download sequence
MVTQPKLRLI SYSNELIDGQ PIYVSSNAFP AKALNREPAG HSFHSAALLL CGFGKEEKEV 60 QADDQNVSSD QSESYFASSE SYSSKGKKKS GDGKDQQDHY ALLGLGHLRF LATEDQIKKS 120 YRETALKHHP DKQASLLLGE LTEAAKEAKK DDIENHFKAI QVAYEVLMDP VKRRVFDSTD 180 EFDDEVPADC SPQNFFKVFG PAFMRNGRWS VIQPVPSLGE ENSSLKEVDS FYDFWYGFKS 240 WREFPHSDEY DLEEAETRDD KRWMERQNSK LREKARKEEH ARVRSLVDNA YKKDPRIARR 300 KEEEKAEKQK KKEAKYLAKR LQEEEAARAA EEERLRKEEE DRQAALAASN QKKIKEKEKK 360 LLRKERARLR TVSALVVSER SYKVTEDDVE SLCMSFDIDQ LKSLCSELEE KSEVCGRARI 420 LKDALGRTDE ECIEVKKVEV KNQQPNGYHE TDIKKVEMKN QLPNGSSVQV KVENPLQSYE 480 KKDKPWSKEE VELLRKGIQK FPKGTSRRWE VISEYIGTGR SVDEILKATK TVLLQKPDSA 540 KAFDSFLEKR KAAPSIASPL TTRQESEGIV SSPTNGPEAN GHKSVSPEKP SSVSNGVQQS 600 SESEIDSNGV SSGINAEAWS AVQERALVQA LKTFPKETNQ RWQRISAAVP GKTVVQCKKK 660 FASMKESFRN NKN

Sequence ? help Back to Top

Protein Sequence Length: 673 aa Download sequence

MVTQPKLRLI SYSNELIDGQ PIYVSSNAFP AKALNREPAG HSFHSAALLL CGFGKEEKEV  60
QADDQNVSSD QSESYFASSE SYSSKGKKKS GDGKDQQDHY ALLGLGHLRF LATEDQIKKS  120
YRETALKHHP DKQASLLLGE LTEAAKEAKK DDIENHFKAI QVAYEVLMDP VKRRVFDSTD  180
EFDDEVPADC SPQNFFKVFG PAFMRNGRWS VIQPVPSLGE ENSSLKEVDS FYDFWYGFKS  240
WREFPHSDEY DLEEAETRDD KRWMERQNSK LREKARKEEH ARVRSLVDNA YKKDPRIARR  300
KEEEKAEKQK KKEAKYLAKR LQEEEAARAA EEERLRKEEE DRQAALAASN QKKIKEKEKK  360
LLRKERARLR TVSALVVSER SYKVTEDDVE SLCMSFDIDQ LKSLCSELEE KSEVCGRARI  420
LKDALGRTDE ECIEVKKVEV KNQQPNGYHE TDIKKVEMKN QLPNGSSVQV KVENPLQSYE  480
KKDKPWSKEE VELLRKGIQK FPKGTSRRWE VISEYIGTGR SVDEILKATK TVLLQKPDSA  540
KAFDSFLEKR KAAPSIASPL TTRQESEGIV SSPTNGPEAN GHKSVSPEKP SSVSNGVQQS  600
SESEIDSNGV SSGINAEAWS AVQERALVQA LKTFPKETNQ RWQRISAAVP GKTVVQCKKK  660
FASMKESFRN NKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11450.1	0.0	MYB family protein