PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026382701.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 357aa MW: 40684.4 Da PI: 10.2507

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026382701.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53	6.3e-17	24	122	2	98
EEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE.......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliy.....rkksgryvltkGWkeFvkangLkegDfvvFkld.gr 87 f++l s ++ s +l +p kf++++ +++ + s t++l+ + gr W+v+li + +r +l+kGW+ Fvk+++LkegD++ +k++ g XP_026382701.1 24 FTTL--SKNFPS-QLKFPEKFVRKClrkELS-NIS-TVSLRGPIGRIWTVELIRkgsedDDDEKRLYLGKGWEIFVKEHHLKEGDVLFLKYKlGG 113 5555..555555.6*********985443.344.9***********8766665555555***********************99554 PP SEE..EEEEE- CS B3 88 sefelvvkvfr 98 s f v vf+ XP_026382701.1 114 SVF--DVLVFD 122 777..776665 PP
2	B3	41.4	2.6e-13	254	338	1	87
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+ ++++ +v++ +++p +f +++ + + ++ +g++W ++ ++++ + ++GW++Fv++n+Lk+gD+++F+ +++ XP_026382701.1 254 FVIAMKSTHVSSIFTMTVPVNFSTKNI-P--RATKFASLKVNGKTWLAEYVSfGACKSSGFRGRGWRDFVRSNKLKVGDVCLFETTSS 338 6677889999999*******98883.2..33456666789****55455555567899******************7655 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MDQGFKADRR NNEDVEKFKL VHFFTTLSKN FPSQLKFPEK FVRKCLRKEL SNISTVSLRG 60 PIGRIWTVEL IRKGSEDDDD EKRLYLGKGW EIFVKEHHLK EGDVLFLKYK LGGSVFDVLV 120 FDDENFCEKE TSYFVRNCKN EGCHRSNGRL NERKRVEREP YAEISEPKRL PKKVKGKRIT 180 SSDDEDEDSG SKTSRLPGRK GKVPASVKRE QDSEEEESQV DRMALVLRNG APKVKGAAYP 240 QALHEGTHKG KPHFVIAMKS THVSSIFTMT VPVNFSTKNI PRATKFASLK VNGKTWLAEY 300 VSFGACKSSG FRGRGWRDFV RSNKLKVGDV CLFETTSSSS SKTSKKSINL DVTIFHK

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MDQGFKADRR NNEDVEKFKL VHFFTTLSKN FPSQLKFPEK FVRKCLRKEL SNISTVSLRG  60
PIGRIWTVEL IRKGSEDDDD EKRLYLGKGW EIFVKEHHLK EGDVLFLKYK LGGSVFDVLV  120
FDDENFCEKE TSYFVRNCKN EGCHRSNGRL NERKRVEREP YAEISEPKRL PKKVKGKRIT  180
SSDDEDEDSG SKTSRLPGRK GKVPASVKRE QDSEEEESQV DRMALVLRNG APKVKGAAYP  240
QALHEGTHKG KPHFVIAMKS THVSSIFTMT VPVNFSTKNI PRATKFASLK VNGKTWLAEY  300
VSFGACKSSG FRGRGWRDFV RSNKLKVGDV CLFETTSSSS SKTSKKSINL DVTIFHK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	3e-31	B3 family protein