PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026382670.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 388aa    MW: 44619.4 Da    PI: 8.8176
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026382670.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3581.7e-1813881390
                    TT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3 13 sgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsef 90
                    +    lpkkf++++   + ++  + t++l+ +sg++W+v+l  ++k+++  +l+kGW+ Fvk+++Lke+D + Fk+ +  ++
  XP_026382670.1 13 H--HLLPKKFVKNClmsEFPEIDGSTVSLKGPSGQTWTVEL--KRKDESkLYLKKGWEIFVKEHNLKENDALFFKYRS--GG 88
                    3..379*****988*9955555677****************..5555555*************************854..44 PP
2B338.12.8e-12283362184
                     EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                     f+    ps+v+  + +v+p k a+++   g++      ++l+  +g++W+ +++y ++  ++  + GWk+Fv  n+L++g  ++F+ 
  XP_026382670.1 283 FVVLIQPSHVSGICFMVIPIKSARKYlpyGSD-----NISLKM-NGKTWQAQYTYYGRIAGF-RGPGWKKFVLKNKLEVGNACLFEK 362
                     5566779999999*************765433.....566555.89*******887776665.577*******************93 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MNFFTFLPKN YHHHLLPKKF VKNCLMSEFP EIDGSTVSLK GPSGQTWTVE LKRKDESKLY  60
LKKGWEIFVK EHNLKENDAL FFKYRSGGIF DVLMFDDGDF CEKESSYFVR NCQGCHRSTN  120
GGLNEGRRVE SEPRRYNEGE NEPRRYKEGE NEPRRSEEEE SEPSIEIIEP KRLRYTDKPI  180
TISDEEQEED ADRETPRLLG REREPVCYGR RLPKSVPGCQ SKAIVRTTEV SFTGENSEDE  240
ETEVNQVSPL AIALQRRTVH AKEIHLPYKQ AVREGKRRGT PHFVVLIQPS HVSGICFMVI  300
PIKSARKYLP YGSDNISLKM NGKTWQAQYT YYGRIAGFRG PGWKKFVLKN KLEVGNACLF  360
EKTTSSATSS RATSNSITFS VSIFRNGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.14e-21B3 family protein