PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026381112.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MIKC_MADS
Protein Properties Length: 302aa    MW: 34994.3 Da    PI: 8.0624
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026381112.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF97.84.5e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k ienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifss+gklyey+s
  XP_026381112.1  9 KLIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSSKGKLYEYCS 59
                    569**********************************************96 PP
2K-box86.17.1e-2985173997
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                     ++   + + +q++ kLk++ e Lq+++R+l+GedL++Ls+keL+qLe+qLe slk++ s++++++++++ elq+ke++l+e+nk+L+kk
  XP_026381112.1  85 VALDVQDETYQDYLKLKARAEVLQQNNRNLQGEDLGPLSVKELEQLENQLEVSLKQVQSTRTQYMFDHLTELQQKEQMLREANKTLNKK 173
                     5555567889****************************************************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MGRGRVELKL IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSS KGKLYEYCSS  60
SSMLKTLERY QRNTNSSTSQ SSEIVALDVQ DETYQDYLKL KARAEVLQQN NRNLQGEDLG  120
PLSVKELEQL ENQLEVSLKQ VQSTRTQYMF DHLTELQQKE QMLREANKTL NKKKVDEDKA  180
EIDLQFSWQA GEQRRQQQVD DHRRKIALQL SRQEGEQRRQ QQQMDEHKAE MALQWSWQAS  240
EQQRQFAAYN HHINAAASER FFQPLECTPS LQSGNSLSNA SNMMNSAAPV QNLLGFFPGW  300
TL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.24e-73MIKC_MADS family protein