PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026380069.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 161aa MW: 17785.2 Da PI: 9.468 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 74 | 2.9e-23 | 6 | 101 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +C+ C++ r +C+++C +a+ fp ++++vhk+FGa++ l++++++++e +++a +sl+ +A+ar+ dPv+G g ++l+ q++ql+ael XP_026380069.1 6 RCEKCRFDRHRCPANCRYAQFFPLGTDDDYKAVHKVFGARKFLSIVDRADPE-QNIASQSLIRQARARVADPVNGLGGSAMQLRGQVNQLRAELI 99 6***********************************************7776.57999**********************************997 PP DUF260 96 ll 97 ++ XP_026380069.1 100 SV 101 65 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 161 aa Download sequence |
MVKIDRCEKC RFDRHRCPAN CRYAQFFPLG TDDDYKAVHK VFGARKFLSI VDRADPEQNI 60 ASQSLIRQAR ARVADPVNGL GGSAMQLRGQ VNQLRAELIS VGIPIRGDIV PQEPPRRCCS 120 TGTTGGRTTS AEREILWGLQ ASEKNVSINL SSTSSIHSSK E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G50510.1 | 1e-15 | LBD family protein |