PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026380068.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HSF

Protein Properties

Length: 355aa MW: 39813.1 Da PI: 4.7333

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026380068.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.3	4e-36	28	120	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y+++ed +++++isw+e+g++f+v+ efa+++Lpk+Fkh+nf+SFvRQLn+YgF+k+ ++ weF h+ Fk+g+k+ll++ XP_026380068.1 28 FLTKTYQLVEDTTVDDIISWNEDGTTFIVWRAAEFARDLLPKFFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFCHDCFKRGEKKLLSD 113 9***************************************************************99.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+k + XP_026380068.1 114 IQRRKVS 120 **975 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MVEQNGETES LSQQQQSQQK SSSLPTPFLT KTYQLVEDTT VDDIISWNED GTTFIVWRAA 60 EFARDLLPKF FKHNNFSSFV RQLNTYGFRK IVPDRWEFCH DCFKRGEKKL LSDIQRRKVS 120 STSSPSPPVV TTTTTTTTVV VAAGSPTDSG DEQVLSSNSS PSTSLIPPVM MASNTINYIR 180 PSGGCSSSST NSELVEENER LRKENQQLSQ ELKQMKNLCN NIFALMTKYK ASTNLHGEEA 240 EDEDNKSGGG GFPAEKPMEF LSLKQFCDDN DAITGGVSDS SRLKAETEED TSSTRLFGVP 300 IRVKRVRTED DEENDQNEEL VKPEPSDSNS KKVVDDESRW LKKCNSLPNR RLCLE

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MVEQNGETES LSQQQQSQQK SSSLPTPFLT KTYQLVEDTT VDDIISWNED GTTFIVWRAA  60
EFARDLLPKF FKHNNFSSFV RQLNTYGFRK IVPDRWEFCH DCFKRGEKKL LSDIQRRKVS  120
STSSPSPPVV TTTTTTTTVV VAAGSPTDSG DEQVLSSNSS PSTSLIPPVM MASNTINYIR  180
PSGGCSSSST NSELVEENER LRKENQQLSQ ELKQMKNLCN NIFALMTKYK ASTNLHGEEA  240
EDEDNKSGGG GFPAEKPMEF LSLKQFCDDN DAITGGVSDS SRLKAETEED TSSTRLFGVP  300
IRVKRVRTED DEENDQNEEL VKPEPSDSNS KKVVDDESRW LKKCNSLPNR RLCLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	1e-74	HSF family protein