PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026379760.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 622aa MW: 66846.4 Da PI: 10.1994

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026379760.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.8	2.9e-09	203	248	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 ++ WT+eEd l+ avk++G+++W+ I + Rt+ q+ rw XP_026379760.1 203 KKHWTAEEDNELIAAVKKFGKRNWADIVKADIfkGDRTASQLSQRW 248 568***********************96532233566666666666 PP
2	Myb_DNA-binding	28.1	4.8e-09	447	492	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 + +WTteEd l avk++G ++W I + R++ q+ +rw XP_026379760.1 447 KSPWTTEEDNELFAAVKKFGERNWVNILKADIlkGDRSAAQLSHRW 492 679************************8853344688888888888 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
MASSDNNTQR RRRKVLIRKE DIASVLTRYS EPTKLSLLEE VAQYPDVKID WNVLVKKTTT 60 GITNGAEYQK LWRHLAYCDK LPETVEEKPK EQHLEYELEA FPPATDEASL EAAACVKVLL 120 ASGLQDDAGG GSATVEAPLT INIPTWQDYK SPLDNPLLCS LKGINITVPV SVQKQLWTAV 180 RTAEEGLDAT VSNAGGQAGI GKKKHWTAEE DNELIAAVKK FGKRNWADIV KADIFKGDRT 240 ASQLSQRWGI IRKRLKLEAG GGELIARQRA TNRAVSSALN MPIINSLLAA YAASVVPNPM 300 VQEAAVAAGA RIATHLTAKS LRKAARSKKS PMPGVHYICT GLSSASPATY STSVPSVSPP 360 PPTPAEKSQV PSASVEAPST INRPTCQDSK SPLDNNPQPC SLNGMDTIVP VSVQKQSSPP 420 AVTIAKGLDG TVSNAVVGRP AKRKRNKSPW TTEEDNELFA AVKKFGERNW VNILKADILK 480 GDRSAAQLSH RWGIIRNRQN ELPDQWLATN RAVTRALNTP MNNSLSAACT VGPANLVASA 540 ATVSSPQIPL QTTKGTSGVM AKRRSITKKT APVVPNPMIQ TAAISAGSRI ATPPTAIPLL 600 KSCTIQTAVH NKHQLCDTTV NP

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

MASSDNNTQR RRRKVLIRKE DIASVLTRYS EPTKLSLLEE VAQYPDVKID WNVLVKKTTT  60
GITNGAEYQK LWRHLAYCDK LPETVEEKPK EQHLEYELEA FPPATDEASL EAAACVKVLL  120
ASGLQDDAGG GSATVEAPLT INIPTWQDYK SPLDNPLLCS LKGINITVPV SVQKQLWTAV  180
RTAEEGLDAT VSNAGGQAGI GKKKHWTAEE DNELIAAVKK FGKRNWADIV KADIFKGDRT  240
ASQLSQRWGI IRKRLKLEAG GGELIARQRA TNRAVSSALN MPIINSLLAA YAASVVPNPM  300
VQEAAVAAGA RIATHLTAKS LRKAARSKKS PMPGVHYICT GLSSASPATY STSVPSVSPP  360
PPTPAEKSQV PSASVEAPST INRPTCQDSK SPLDNNPQPC SLNGMDTIVP VSVQKQSSPP  420
AVTIAKGLDG TVSNAVVGRP AKRKRNKSPW TTEEDNELFA AVKKFGERNW VNILKADILK  480
GDRSAAQLSH RWGIIRNRQN ELPDQWLATN RAVTRALNTP MNNSLSAACT VGPANLVASA  540
ATVSSPQIPL QTTKGTSGVM AKRRSITKKT APVVPNPMIQ TAAISAGSRI ATPPTAIPLL  600
KSCTIQTAVH NKHQLCDTTV NP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	6e-62	MYB_related family protein