PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026378587.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | bHLH | ||||||||
Protein Properties | Length: 202aa MW: 22526 Da PI: 7.1927 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.5 | 3.7e-11 | 29 | 72 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +ErrRRd++N ++ eLr+++P + ++Ka+ A+ YIk Lq XP_026378587.1 29 DAERRRRDKLNARLMELRSIVPII-----TSMTKAAAIDDAITYIKGLQ 72 68*********************6.....58*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MKYSGSGSGR GRGTLNEHGI LVFKSKNLDA ERRRRDKLNA RLMELRSIVP IITSMTKAAA 60 IDDAITYIKG LQKQVEGLGD CLNQMDVAVP QALEEESIAG KVELDQNIEK YTIEEQVKVT 120 SLEGDNLSIK ITCYSKRGIF TRLLELITTL GYEIMDNNFT SFKGVCLTTL SVKGNRVEIT 180 ELEKLEELLL KVVRGLNSNV QL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 31 | 36 | ERRRRD |
2 | 32 | 37 | RRRRDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21330.1 | 4e-36 | bHLH family protein |