PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM90716.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 287aa MW: 32325.8 Da PI: 10.0967 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 344.8 | 2.1e-105 | 1 | 287 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssia.erdaki....rernlalsekkaavaerd..........maflqrdkalaernkalverdnkllal 84 mddd+ + rn+gyyep+ +k +l+lqlmss+a erd+k+ r + l ++++a+++rd ++ r+ ++++ ++k+ ++ OWM90716.1 1 MDDDALNMRNWGYYEPS--FKGHLNLQLMSSMAaERDTKPflsgRGDPTVLVTTNGAYHPRDslvsdtqvpySSY-TREGWMNQ--------REKFYSM 88 9***9999*******99..*************99*********9777777************8877777775556.67777777........7899999 PP GAGA_bind 85 llvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesa 183 l+ ++p++++vl++t+s +++ q+ + +++lr+ +k+ +++ e++ ++ke+ ++kkrq+++ k++k kk++k + k+ ++++s+ OWM90716.1 89 LP-------TNPTNYNVLPETSSEHQSL-----QMLQMPEPLRDDNKMGKPE--EQQAVKKENGQTKKRQSGNALKTPKPKKPRK-P---KDPSTNPSS 169 99.......3578999999999887443.....3555566666666665555..5567788888999999999999999999998.2...333444444 PP GAGA_bind 184 derskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnp 282 +rsk++kks+d+v+ng+++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt++S+yPLP+stkrrgaRiagrKmSqgafkk+LekLaaeGy+++np OWM90716.1 170 VQRSKQPKKSMDVVINGIDMDISGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTQVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANP 268 589************************************************************************************************ PP GAGA_bind 283 vDLkdhWAkHGtnkfvtir 301 +DL++hWAkHGtnkfvtir OWM90716.1 269 IDLRTHWAKHGTNKFVTIR 287 ******************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
MDDDALNMRN WGYYEPSFKG HLNLQLMSSM AAERDTKPFL SGRGDPTVLV TTNGAYHPRD 60 SLVSDTQVPY SSYTREGWMN QREKFYSMLP TNPTNYNVLP ETSSEHQSLQ MLQMPEPLRD 120 DNKMGKPEEQ QAVKKENGQT KKRQSGNALK TPKPKKPRKP KDPSTNPSSV QRSKQPKKSM 180 DVVINGIDMD ISGIPIPVCS CTGTPQQCYR WGCGGWQSAC CTTQVSMYPL PMSTKRRGAR 240 IAGRKMSQGA FKKVLEKLAA EGYNFANPID LRTHWAKHGT NKFVTIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14685.1 | 1e-101 | BBR-BPC family protein |