PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM90458.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 271aa    MW: 29654.6 Da    PI: 9.7993
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM90458.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.81.1e-09156202454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +h+ +Er RR++i +++  L+e++P +    +k   Ka +L k ++YI+sL
  OWM90458.1 156 SHSLAERARREKISERMKILQEIVPGC----NKVIGKALMLDKLINYIQSL 202
                 8*************************9....677***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MDPLLITESA FSAASLSAYS LSEIWPLRGE ASNRVPTGLQ VGSLGRLGKQ DGTGEASMVT  60
AHSGRRKRKG VTAGMEEEDG GSSRMCSATH GNILNGSSNK STKIGQPRDD IHSSEPKAAT  120
SSAAVWYKQV DQSSRPPGPP KGYIHVRARR GQATDSHSLA ERARREKISE RMKILQEIVP  180
GCNKVIGKAL MLDKLINYIQ SLRQQVKFLS MKLEAVNSRT NMNPNIDGFP PKDPFDATGM  240
MFAPQTAREY MSAPEPEWLH MQIGTNFEQP E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.14e-62bHLH family protein