PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM90167.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 243aa MW: 25772.9 Da PI: 7.4461 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.1 | 4.4e-18 | 35 | 85 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g+Wv+eIr p ++++r++lg++ t+e Aa+a++aa ++++g OWM90167.1 35 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCIKG 85 59*****998.**********9...336***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MVKSEQKIQS SKLHPTSPTA SSEASPSSVN KNMKKKYKGV RMRSWGSWVS EIRAPNQKTR 60 IWLGSYSTPE AAARAYDAAL LCIKGSSASS SLNFPISSAS YYGIPHDGNP LMSPKSIQRV 120 AAAAAAAATG GSAKALGGAA PPLAPPPPPS LSPSIADSSP SMSYSSPSDQ HDDEVSPACG 180 YDPFWGSHKS EPTSAMDSWC KLESPKYVDL MVNGAALDTA IATNFLMDDF FNEEGDIRLW 240 SFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 7e-31 | ERF family protein |