PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM89792.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

TCP

Protein Properties

Length: 302aa MW: 31341.9 Da PI: 9.5654

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM89792.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	116.4	3.7e-36	57	140	2	84
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasn 84 ++k+++++++h kv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLl qa+pai ++tg+++ +as+ a+ss+s+++n OWM89792.1 57 PPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKTDGETIQWLLHQAEPAILAATGSGTVPASALsAAGSSVSEQGN 140 789******************************************************************888555555555443 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MEPNGLSSAP AATMASAETN TTTKNKPSEI KDFQIVISAS KGFDDQNSAG RKQLSAPPKR 60 SSNKDRHKKV DGRGRRIRMP ALCAARIFQL TRELGHKTDG ETIQWLLHQA EPAILAATGS 120 GTVPASALSA AGSSVSEQGN PNPINLGGKM EGLGQNLIGF AGLSRPALPI IGSGFGIGKS 180 QAGGVLWPSA GGAGPGFVPY PDQPGSSFGL HGVDFPNVNM GLVNFQAFFA GSNHQVPGLE 240 LGLSQDSNNN SVTAAMSSQA LSQMYLQHQH VGQVRDSGTT GPVSTQKQRT AVEEDNSRGS 300 GD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	1e-60	TCP family protein