PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM89483.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 322aa    MW: 34593 Da    PI: 6.724
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM89483.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1048.3e-33151208259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp+vv++tYeg+H h+
  OWM89483.1 151 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTVVITTYEGQHCHH 208
                 8******************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MDGDKRPRDQ RPHADPPPEF FFFGDDQDSS ILSEFGWSLP EPASLASRSG ELGSVGAGSA  60
GTSAEPAETT TTAEVEGAGG GGPPAGGLEA STSNYPAVSS DSSEDPAEKS TGSGGNPPAE  120
TPSNKVRKKG QKRIRQPRFA FMTKSDVDHL EDGYRWRKYG QKAVKNSPFP RSYYRCTNSK  180
CTVKKRVERS SEDPTVVITT YEGQHCHHSV GFPRGGSGVL TPNENATAFG PQLAPPLFPQ  240
LYHPPRVLNL NPSPREINSP PRPPNLPPRP LATSSGSDSQ QLPPHSSEEF QAQQQLGRSN  300
PPDLPTDEGL LGDMVPSGMR HR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.25e-68WRKY family protein