PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM89234.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 154aa MW: 16935.1 Da PI: 4.286 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.6 | 1.1e-16 | 2 | 51 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 ykGVr ++ +g Wv+eIr+p+ + r++lg+f+ +++Aa+a++aa +l ge OWM89234.1 2 YKGVRMRE-WGTWVSEIRVPK----TgERIWLGSFDDPKKAARAHDAALYCLQGE 51 9*****99.**********95....35************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
MYKGVRMREW GTWVSEIRVP KTGERIWLGS FDDPKKAARA HDAALYCLQG ENAVFNFPNE 60 KRPVGLVPSS GSSFKKDIKE IANTFASLND SENPVDIQVP GNVQDLPYIP VIGEMEAAGT 120 GVSEPSVSTM IADDLPENLF TDDWLSMAMG LLND |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31060.1 | 6e-35 | ERF family protein |