PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88975.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 318aa    MW: 35497.4 Da    PI: 7.1383
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88975.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.81e-094594154
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                r++ +  rE+ RRdr+N+ f eL   l ++     +K++Ka+iL+ +++ +++L
  OWM88975.1 45 RKVQKADREKLRRDRLNEHFLELGNALDPD----RPKNDKATILTDTIQVLRDL 94
                5677889********************997....79**************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MDQWKTDLGP STSSHQPQPT RLHNSQAEQP RQGPAVEVKD PIAARKVQKA DREKLRRDRL  60
NEHFLELGNA LDPDRPKNDK ATILTDTIQV LRDLTAEVTK LKAEYAALSE ESRELMQEKN  120
ELREEKVSLK TDIENLNTQY QQRVRVTYPW ATIDPSLVMA PTYPYPVPLP VHQGPIPIHP  180
SLQPFPFFGN QNPAPCSTYI PYPAPAHPTV EPHSVHYASS SHVSSKLDSK SKSSEHHRGS  240
NPDRTDDLND VATELELKMP GSSSTQQDLG SDERKGKQTR RKDKTVVTDG SSSSRFSSSQ  300
ALQDSSSTSV GDIPRPSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.12e-74bHLH family protein