PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM88432.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | ERF | ||||||||
Protein Properties | Length: 248aa MW: 26772.8 Da PI: 5.0757 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.6 | 3.1e-18 | 42 | 92 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ykGVr ++ +g+Wv+eIr p ++++r++lg++ t+e Aa+a++aa ++l+g OWM88432.1 42 KKYKGVRMRS-WGSWVSEIRAP---NQKARIWLGSYSTPESAARAYDAALLCLKG 92 59*****998.**********9...336************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MVRVEQHKIQ SPSAEPFSRS KDKGLGKAAA SPSIDKKNMK MKKYKGVRMR SWGSWVSEIR 60 APNQKARIWL GSYSTPESAA RAYDAALLCL KGGSAAGLNF PVDNVHHYPC ETLMSPKSIQ 120 RVAAAAANGI YGNAAASTES PVSSPSISTA SCSSSSSSSP SSPANQQDDH ETLPTTDLPP 180 SSATMSCDID DCLMQSLVTW TDFNYTLPWP ELYFEDESFI SGAALDPTVL LDDSPYEDGS 240 DIRLWSFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 6e-33 | ERF family protein |