PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM88361.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 185aa MW: 21292.9 Da PI: 7.762 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.6 | 5.2e-07 | 16 | 41 | 1 | 24 |
TSSS-HHHHHHHHHHHHHTTTT..-H CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tW 24 +g+WT+eEd++l ++++ +G++ +W OWM88361.1 16 KGAWTAEEDQKLSQYIEIHGPKrlRW 41 79******************985555 PP | |||||||
2 | Myb_DNA-binding | 53.1 | 7.3e-17 | 51 | 96 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l OWM88361.1 51 RGNISDEEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 96 7899******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MAPRNDRANA KKVMNKGAWT AEEDQKLSQY IEIHGPKRLR WLNYLRPNIK RGNISDEEED 60 LILRLHKLLG NRWSLIAGRL PGRTDNEIKN YWNSHLSKKI NQKEKTQQPS PAQESAPPPK 120 LVESVQADEN QGTKTTANLD VNFDVNEFFD FSTGGSYGLE WVNKFLELDE DSWMLEKGEG 180 KRGLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52600.1 | 3e-40 | MYB family protein |