PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88343.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 291aa    MW: 30972.5 Da    PI: 6.9259
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88343.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.7e-20144194255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdps+ng  +r++lg++ tae+Aa a+++a+ +++g
  OWM88343.1 144 HYRGVRQRP-WGKFAAEIRDPSKNG--ARVWLGTYETAEDAALAYDRAAYRMRG 194
                 7********.***********9998..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MKRTYEEVIA QQQQHYSDLA LLESISLYLL GESSDSTLGA SNFTSTTSMN YLSATGGQSF  60
PETWAELPFK EDDPQDMVLY GVLHDGWGAA NPPEVGPFDS FSHIGVAVKA EPAECSPETV  120
PTAVVLPETV AAPAARAATS KGRHYRGVRQ RPWGKFAAEI RDPSKNGARV WLGTYETAED  180
AALAYDRAAY RMRGSRALLN FPLRINSGEP EPVRVTSKRS SPEPSSSSSS NSSGSGATKR  240
RRKVAAAVET ASSGTQAGPG IVTEGGAERC QVGVQVVATC TNGKQLLVGR C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.17e-47ERF family protein