PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM88287.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | C2H2 | ||||||||
Protein Properties | Length: 249aa MW: 27391.4 Da PI: 8.2224 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.3 | 0.00012 | 92 | 114 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H OWM88287.1 92 YTCTFCRREFRSAQALGGHMNVH 114 9********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MVTINKSSMA AELGLVSLTQ LQQQLLLSAA HSQPDTSSTG DRSSSWMWNP NPSPKHQQPG 60 GLLEEKDDSW EVRAFAEDTG SIMGTTWPPR SYTCTFCRRE FRSAQALGGH MNVHRRDRAR 120 LHQTQYSPTG RPCSFPTTSN STTPPPPLII SNQDFAAQRG LCLLYQLPNP NGFISTRTIN 180 NNTCLDSSSP STLLSISAYR PNTNSSSNSP RSEAETSSDE GTKMKKSNNI SKESSVEIDL 240 ELRLGQRPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17810.1 | 2e-32 | C2H2 family protein |