PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM88281.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 692aa MW: 75742.2 Da PI: 6.0286

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM88281.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	4.8e-13	513	558	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YIk+L OWM88281.1 513 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYIKEL 558 799*********************6.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MTDYRALPPT MNLWTDDNAS MMEAFMTSDL SSFWPPAPPP PPPPPAVPTP PFQSSSSATS 60 SGPQPQPQPQ PFNQETLQHR LQTLIEGAHE SWTYAIFWQC SYDYAGPAPV PVLGWGDGYY 120 KGEEDKSKSK PKPSKSPLTP TSAAEQEHRK RVLRELNSLI AGPSATSDDA VDEEVTDTEW 180 FFLVSMTQSF VNGGGLPGQA FFNSNPIWLS GSDRMASSSC ERARQGQVFG LQTMVCIPLA 240 NGVVELGSTE LIFQNSDLMS KVRVLFNFNN GSPETGSWPP LNNSSAANQG ENDPASIWIN 300 DPSTSAIEIN KENSSSVPLA SSNPAGNHTL SKSMAFENHP SSSSLSENPG TIHRDNHRRG 360 SQPMQSQSYF TRELNFSEFG HDGSNPRNGN SHLMKPETGE ILNFGESQRS ACNGNGDLYS 420 GNPQFPAAED NNKRKKSPTS RGSNEEGMLS FTSGVVLPSS GMVKSSGGAG DSDHSDLEAS 480 VVKEAVTSRV VETEKRPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY ALRAVVPNVS 540 KMDKASLLGD AISYIKELNV KLQEADTNRE DLQKQLDALK KELSSKDSRT LPPPGDKDIS 600 SSNSLGSKLI ELDVDVKIIG WDVMIRIQSS KKNHPAARLM HALMELDLDV HHASVSVVND 660 LMIQQATVKM GSRFYTQEQL RVALSSKIGE AR

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MTDYRALPPT MNLWTDDNAS MMEAFMTSDL SSFWPPAPPP PPPPPAVPTP PFQSSSSATS  60
SGPQPQPQPQ PFNQETLQHR LQTLIEGAHE SWTYAIFWQC SYDYAGPAPV PVLGWGDGYY  120
KGEEDKSKSK PKPSKSPLTP TSAAEQEHRK RVLRELNSLI AGPSATSDDA VDEEVTDTEW  180
FFLVSMTQSF VNGGGLPGQA FFNSNPIWLS GSDRMASSSC ERARQGQVFG LQTMVCIPLA  240
NGVVELGSTE LIFQNSDLMS KVRVLFNFNN GSPETGSWPP LNNSSAANQG ENDPASIWIN  300
DPSTSAIEIN KENSSSVPLA SSNPAGNHTL SKSMAFENHP SSSSLSENPG TIHRDNHRRG  360
SQPMQSQSYF TRELNFSEFG HDGSNPRNGN SHLMKPETGE ILNFGESQRS ACNGNGDLYS  420
GNPQFPAAED NNKRKKSPTS RGSNEEGMLS FTSGVVLPSS GMVKSSGGAG DSDHSDLEAS  480
VVKEAVTSRV VETEKRPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY ALRAVVPNVS  540
KMDKASLLGD AISYIKELNV KLQEADTNRE DLQKQLDALK KELSSKDSRT LPPPGDKDIS  600
SSNSLGSKLI ELDVDVKIIG WDVMIRIQSS KKNHPAARLM HALMELDLDV HHASVSVVND  660
LMIQQATVKM GSRFYTQEQL RVALSSKIGE AR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	495	503	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	0.0	bHLH family protein