PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM88168.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 330aa    MW: 35479.3 Da    PI: 5.588
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM88168.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.73.8e-31150208259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+ver+++dp ++++tY+geHnh+
  OWM88168.1 150 SDIWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERNRSDPGMFVVTYTGEHNHP 208
                 79*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MDDDWDLHAV VRGCCTAAST TGTATATATA TLPSAGTLSS SHEYLHVLPF CSSAPPCIGP  60
AKKDVELPDL FEELHELSKP FFAPKSEPLI LQNAAVSPLP LPLPPFGRPS NGAGGRVQIK  120
RPSPVASSRS KRRKSQFKKV CQVPAENLSS DIWAWRKYGQ KPIKGSPYPR GYYRCSSSKG  180
CLARKQVERN RSDPGMFVVT YTGEHNHPAP THRNSLAGST RQKPATSGDP PSASNVHVPP  240
PSSSPATSPE EEEEAMPQST SRGEHDDSME DDEDGEVGLS HMALDDDFFV GLEGLLDDDR  300
EDCFLDRFPA NFGLSWDAAT NSSVTTAGGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-56WRKY family protein