PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM87595.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GATA
Protein Properties Length: 342aa    MW: 36835.5 Da    PI: 7.1665
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM87595.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11e-17254287134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  OWM87595.1 254 CLHCEITKTPQWRAGPLGPKTLCNACGVRYKSGR 287
                 99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MVGPIHNGGM EDMDCGSFFD HIDDLLDFPM NENDIDAAGL PGRLDSFPSI WTAGSDSVFS  60
NSNTDLSAQL SVPYEDIVQL EWLSNFVEDS FAGDGSLAVN NSTKQETSNL TKEEPFHTGQ  120
FHTTSPVSVL ESSSSSFGEK PGPDGLAPLP GGRRGKARSK RARPATFNPR PAMQLISPTA  180
SSVAENLAPS VSLKALSDSE NYAESRPAVI KIPKQPSLEN GEPKKKKKKI KLTIVQKSGD  240
AGENSLPGQA VRKCLHCEIT KTPQWRAGPL GPKTLCNACG VRYKSGRLFP EYRPAASPTF  300
IPAVHSNSHK KVLEMRSKMG PVSTTGTPTE LIPNPTVPLD YM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.23e-40GATA family protein