PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM86790.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family WRKY
Protein Properties Length: 338aa    MW: 38209.7 Da    PI: 7.2899
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM86790.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.31.8e-29168227159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rs +dp+v++ tYegeHnh+
  OWM86790.1 168 VKDGYHWRKYGQKVTRDNPSPRAYFKCSFApNCPVKKKVQRSVDDPSVLVATYEGEHNHH 227
                 58***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MKSTLVTTPT LHPPPMDLNS VVVDTSLDLS INSFRHHENH CKGEIDFGDN YDRDEGRTER  60
PSAAKQEGTT VPLEELNRIK SENKKLTEML FTMYGDLRSQ MMDMKSSGNG STTRKRKYED  120
YEWHNVIRIC ESSANSDEEV YRRAQESTRT KVSRVYVRID PSDMSLNVKD GYHWRKYGQK  180
VTRDNPSPRA YFKCSFAPNC PVKKKVQRSV DDPSVLVATY EGEHNHHCPT QPKIVSPGCS  240
STSQGYPKPV FVLPNSPSTP VMRSPTPNVV LDLVQQPGLP NPAAKQHVRE SDNEETFSTE  300
DNNLPQLWVQ QMASSLTRDP NFTAALAAAV SGRIFETW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-66WRKY family protein