PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM86602.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 238aa MW: 25708.8 Da PI: 5.1314 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.4 | 1.8e-18 | 54 | 103 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+++++g OWM86602.1 54 VYRGVRMRN-WGKWVSEIREPKK---KSRIWLGTFPTPEMAARAHDVAALSIKG 103 59****998.**********854...6***********************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 238 aa Download sequence |
MIDPTSGFDP ETSSNSSSSS PLLSSPNRAS LETRNQPGDL KKAKRLRDSS KHLVYRGVRM 60 RNWGKWVSEI REPKKKSRIW LGTFPTPEMA ARAHDVAALS IKGGSAILNF PELAGSLPRP 120 ASLAPRDIQA AAAEAARMGH LNPSAGPLAK SSTSSTSVSI ATSDELGEII ELPSLEASYG 180 ELPEFVLIDS VDAWGYRGDI IDSPWGEEVC GFDDHQCGYI CDGLSCIQNG FEGLLWNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G11590.1 | 1e-56 | ERF family protein |