PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM86434.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 294aa MW: 32074.7 Da PI: 8.5827

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM86434.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00044	162	184	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F+++ L H tH OWM86434.1 162 HRCEVCKKAFRSSQALGGHRVTH 184 79**************9999888 PP
2	zf-C2H2	12.3	0.00053	216	238	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k+F + L H r+H OWM86434.1 216 FECPYCFKVFGSGQALGGHKRSH 238 89**************9999999 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MERPKCKLCS RTFANGRALG GHMKAHLATL PLPTKPLHRH LTADQSTSIS SATHSSSPAS 60 SSRDSAEDEN GDDKANSMYK LRENPRRSLK LSDPEFSSPN EAAALDGEES EAESTRRLGK 120 RARGKPCSAG EGEEEAAIAM CLVMLSREKW TTAAAKSDVK RHRCEVCKKA FRSSQALGGH 180 RVTHRKAMNV KEEAAEKKYH NQRRFVDDDN EGEKIFECPY CFKVFGSGQA LGGHKRSHVL 240 GSGNGLNGSP VNSSKARNHK QNGLIDLNLP APPEEEDDRS VVSDGEITEA PGRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45120.1	6e-28	C2H2 family protein