PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM86416.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 343aa    MW: 36857.9 Da    PI: 6.7898
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM86416.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.17.4e-1298142347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r     Rt+ q+ s+ qky
       OWM86416.1  98 PWTEEEHRMFLLGLQKLGKGDWRGISRNYVISRTPTQVASHAQKY 142
                      8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKLFGVRL TDGLIRKSAS MGNLNHYSGS GSGAHPNNPA  60
SPGETTPDHG AAADGYASED FVPGTSSSSC RERKKGVPWT EEEHRMFLLG LQKLGKGDWR  120
GISRNYVISR TPTQVASHAQ KYFIRQSCVS RRKRRSSLFD IVADEGGDVP MESQDFFPID  180
HSKPEAESND QLPGPPPLPP PPPLEEECES MESTNSNEGG DTAAPVPKPE ISQPSYPVIY  240
PPAAYFSPFF PFSLPLWPGY SGEPVKTEEA HEVVKPTAVH SKSPINVDEL IGMSKLSLGE  300
SIGNSGQSSL SLKLLEGSTR QSAFHANTTS GGSTSGSSPV QAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-121MYB_related family protein